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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946040.1_cds_XP_016488338.1_78980
CDS Infomation

[gene=LOC107808341] [db_xref=GeneID:107808341] [protein=probable protein phosphatase 2C 12] [protein_id=XP_016488338.1] [location=complement(join(113971..113993,114080..114282,114399..114631,114711..114836,115751..115858,116136..116199,116286..116439,116774..116945,118187..118384))] [gbkey=CDS]
Sequence

ATGTTGTCTAAGGGTGAACATCAAACGGTCCCATTGTCTGTGTTGTTAAAGCGTGAATTG
GCTAATGAGAAGATTGAAAGACCTGAGATTTCTCATGGTCAAGCTAGTCAGAGCAAAAAA
GGCGAAGACTTTACGTTTGTTAAGACCGAATGTCAGCGAGTTTTGGGTGATGGAGTTGCC
ACTTATTCTGTATTTGGATTATTTGATGGGCACAATGGGTCAGCAGCCGCTATATATGCT
AAAGAAAATCTCTTGCAGAATGTGTTGAGTGCTATTCCTCCAGATCTTAGCAGAGATGAA
TGGGTTGCAGCACTTCCTAGAGCTTTGGTTGCAGGATTTGTCAAAACAGATAAAGATTTC
CAAGAAAGAGCAAAAACCTCAGGGACAACAGTCACGTTTGTCATAATTGAAGGATGGGTT
GTAACAGTTGCATCAGTTGGCGATTCTCGGTGCATACTAGAATCAGCTGAAGGAGGAATT
TATTATCTATCAGCCGATCATAGGCTTGACTGCAATGAAGAGGAGAGGGAACGTATAACA
GCCTGTGGTGGAGAAGTTGGCCGGCTTAATGCTGGTGGTGGTACAGAGATTGGTCCTTTG
AGATGTTGGCCTGGTGGGCTCTGCCTCTCGAGATCCATTGGAGATATGGATGTTGGCGAA
TATATAGTTCCTGTACCCTATGTGAAGCAAGTGAAGCTATCAGCAGCAGGTGGAAGGCTT
GTAATAGCAAGTGATGGTGTCTGGGATGCTTTATCTGCAGAAATGGCTGTTGAATGCTGT
CACGGAATGCCTGCGGATGCTTCCGCCTCCCAAATTGTAAAAGAAGCTGTACAGCCAAAA
GGGATTCGAGATGATACGACCTGTATTGTGCTCGATGTACATCCCCCAGAAAAACCAATT
CCTCCACCGCCACCCAAAAAGTCAGGAAAAGGAGTATTCAAGTCTATGTTTCGCAAAAGA
ACTTCGGCGTCGTCTTCTGATATTCAGAAAGATTTTTGTGAACCGGATGTAGTGGAAGAA
CTATTTGAGGAAGGATCTGCATCTCTTTCAGACAGGTTAGACGCGAAATATCCAGTGTGC
AACATGTTTAAGTTATTCATATGTGCCATCTGTCAAGTGGAGATAAAGCCAGGTCAAGGT
GTTTCAATACATGCTGGCTCCTCGAAGACAAGATATTCGCGGCCATGGGATGGCCCTTTC
CTATGCTCAAGCTGCCAAGAGAAGAAAGACGCCATGGAAGGAAAGAGACCTTTTGGAGAT
GCAAGATATAATAGTGAGTGA

Peptide Sequence

PEP ID

XP_016488338.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 12 [Nicotiana tabacum]
Sequence

MLSKGEHQTVPLSVLLKRELANEKIERPEISHGQASQSKKGEDFTFVKTECQRVLGDGVA
TYSVFGLFDGHNGSAAAIYAKENLLQNVLSAIPPDLSRDEWVAALPRALVAGFVKTDKDF
QERAKTSGTTVTFVIIEGWVVTVASVGDSRCILESAEGGIYYLSADHRLDCNEEERERIT
ACGGEVGRLNAGGGTEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPYVKQVKLSAAGGRL
VIASDGVWDALSAEMAVECCHGMPADASASQIVKEAVQPKGIRDDTTCIVLDVHPPEKPI
PPPPPKKSGKGVFKSMFRKRTSASSSDIQKDFCEPDVVEELFEEGSASLSDRLDAKYPVC
NMFKLFICAICQVEIKPGQGVSIHAGSSKTRYSRPWDGPFLCSSCQEKKDAMEGKRPFGD
ARYNSE

Transcript Sequence

Gene sequence data has not been registered.